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Table 3 New CODD domains in P. falciparum at 10% FDR

From: Fitting hidden Markov models of protein domains to a target species: application to Plasmodium falciparum

  Dom. Fam. Abs. P.f. Abs. Alv.
Pfam 404 (330) 228 (169) 85 (66) 26 (24)
Score Adjustment 427 (332) 226 (151) 82 (63) 24 (22)
Enriched Alignment 529 (312) 274 (131) 93 (55) 21 (18)
Substitution Matrix 474 (379) 266 (197) 99 (85) 32 (31)
Match-state Clustering 516 (358) 288 (180) 111 (81) 39 (34)
  1. Number of new domains (Dom.), domain families of the new domains (Fam.), domain families previously thought to be absent in P. falciparum (Abs. P.f.), and domain families previously thought to be absent in all Alveolata (Abs. Alv.), identified by CODD with the different libraries at 10% FDR. Numbers in parenthesis refer to domains/families that are new compared to Table 1 for the same library.