Figure 4
From: Ultrahigh-dimensional variable selection method for whole-genome gene-gene interaction analysis
Correlation matrix for PPM1A and ULK4. (a) PPM1A and (b) ULK4, Upper- and lower triangle parts are haplotype- and genotype-based correlation coefficients for cases/controls (%), respectively. Pairs are highlighted if the difference from cases to controls is less than −0.06 (skyblue) and is larger than 0.06 (gold), SNP-SNP pairs detected by EPISIS are emphasized by red diamond symbol. SNPs are coded as follows: (a) 1. rs17093348, 2. rs6573295, 3. rs4901972, 4. rs11849674, 5. rs10148587, 6. rs188620, 7. rs10137732, 8. rs6573298, 9. rs7145505, 10. rs8019531, 11. rs11628587, 12. rs11628628, 13. rs8011227, 14. rs7158657, 15. rs17097243, 16. rs10142834, 17. rs17097262, 18. rs1887104, 19. rs1887103, 20. rs7154773, 21. rs8012816, 22. rs10130695; (b) 1. rs9311275, 2. rs9832048, 3. rs9852385, 4. rs13069584, 5. rs7627972, 6. rs2632594, 7. rs9812025, 8. rs6599155, 9. rs12054014, 10. rs12054016, 11. rs7649806, 12. rs6794510, 13. rs6809441, 14. rs33916626, 15. rs11129908, 16. rs7618902, 17. rs4973952, 18. rs9878069, 19. rs1495696, 20. rs1495698, 21. rs9834824.