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Table 1 The average running times for the protein workflow

From: Tavaxy: Integrating Taverna and Galaxy workflows with cloud computing support

Protein Name

Taverna

Tavaxy-local

Tavaxy-optimized

NP_061857.3 (gi|239047414)

4:10

8:05

3:04

NP_203747.2 (gi|37674210)

4:17

8:45

3:16

NP_060327.2 (gi|24586675)

4:36

7:36

3:21

Q9UNH5.1 (gi|55976620)

4:31

7:24

3:13

O60729.1 (gi|55976216)

4:35

7:18

3:03

P30304.2 (gi|50403734)

2:50

8:30

3:01

P30305.2 (gi|21264471)

2:50

8:30

3:01

NP_001781.2 (gi|125625350)

1:48

7:22

3:20

NP_054907.1 (gi|7661832)

2:08

7:36

2:54

Example seq.

1:21

7:17

2:44

  1. The average running times in minutes for different protein sequences and for different execution scenarios of the protein homology workflow. The last protein, Example seq., is the example protein distributed with the Tavernaworkflow. The other proteins are from the study of [45].