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Table 12 R-code for overlap matching

From: Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses

# match

> matchedIDs < − matchCGHcall2ExpressionSet(CNdata, GEdata, 1, 2, 3,

1, 2, 3, method = “overlap”)

> # generate matched objects

> CNdata < − cghCall2subset(CNdata, matchedIDs[,1])

> GEdata < − ExpressionSet2subset(GEdata, matchedIDs[,2])