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Table 11 Residue-based evaluation of Methods on the RB44 Dataset

From: Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art

Method

IR

Specificity

Sensitivity

F measure

MCC

PSSMSeq_RBFK

3.5

0.33

0.84

0.47

0.33

 

5.0

0.47

0.80

0.59

0.38

PSSMSeq_RBFK Surface

3.5

0.36

0.83

0.51

0.37

 

5.0

0.51

0.78

0.62

0.42

KYG

3.5

0.40

0.73

0.52

0.38

 

5.0

0.55

0.67

0.60

0.41

DRNA

3.5

0.75

0.27

0.40

0.38

 

5.0

0.94

0.23

0.37

0.39

OPRA

3.5

0.40

0.54

0.45

0.30

 

5.0

0.57

0.51

0.54

0.36

  1. Performance measures computed on the RB44 dataset (IR - Interface Residue definition in Ã…).