Skip to main content

Table 12 Protein-based evaluation of Methods on the RB44 Dataset

From: Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art

Method

IR

Specificity

Sensitivity

F measure

MCC

PSSMSeq_RBFK

3.5

0.32

0.80

0.44

0.27

 

5.0

0.45

0.76

0.55

0.30

PSSMSeq_RBFK Surface

3.5

0.35

0.79

0.47

0.32

 

5.0

0.48

0.74

0.57

0.35

KYG

3.5

0.39

0.68

0.49

0.33

 

5.0

0.54

0.63

0.56

0.36

DRNA

3.5

0.94

0.23

0.21

0.19

 

5.0

0.98

0.19

0.21

0.19

OPRA

3.5

0.51

0.46

0.36

0.21

 

5.0

0.64

0.45

0.43

0.25

  1. The values reported are averages over the 44 proteins in the dataset (IR - Interface Residue definition in Ã…).