Table 3 Average Performance (Correct Adjacencies)
From: SIS: a program to generate draft genome sequence scaffolds for prokaryotes
Programs | Closest | Top 10 | Top 20 |
|---|---|---|---|
sis (promer) | 60.96 | 50.01 | 37.27 |
r2cat | 59.72 | 44.19 | 30.30 |
Mauve | 58.65 | 46.31 | 32.17 |
sis (nucmer) | 56.39 | 43.95 | 28.55 |
fillScaffolds (nucmer) | 48.47 | 34.10 | 21.32 |
OSLay | 46.83 | 34.03 | 21.28 |
fillScaffolds (promer) | 44.19 | 32.94 | 21.63 |
CONTIGuator | 42.02 | 30.35 | 20.01 |
Projector 2 | 36.89 | 25.35 | 15.51 |
ABACAS | 33.80 | 23.95 | 13.20 |