Rank | Methods | Accuracy | |||||
---|---|---|---|---|---|---|---|
Sets | Rank. Algo | Aggrgt | Median | Avg | σ | Iqr | |
1 | 1:10 | Global | SVD | 89.2 | 79.5 | 18.9 | 33.2 |
2 | 1:10 | Global | None | 88.3 | 81.0 | 17.7 | 31.3 |
3 | 1 | Global | None | 87.8 | 80.7 | 17.5 | 31.0 |
4 | 1:10 | Global | SetSig | 87.4 | 81.1 | 16.5 | 26.1 |
5 | 1:10 | Global | AVG | 85.6 | 78.7 | 18.4 | 32.6 |
6 | 1:10 | SAM-GS | SetSig | 85.4 | 79.9 | 17.1 | 30.2 |
7 | 1:10 | SAM-GS | None | 84.6 | 80.1 | 17.3 | 30.7 |
8 | 1 | Global | SVD | 83.8 | 77.9 | 20.1 | 34.3 |
9 | 1:10 | GSEA | SetSig | 83.4 | 78.3 | 16.7 | 26.3 |
10 | 1:10 | GSEA | None | 82.3 | 80.0 | 16.8 | 30.4 |
11 | 1:10 | SAM-GS | SVD | 79.9 | 77.1 | 18.0 | 32.1 |
12 | 1:10 | GSEA | SVD | 79.2 | 77.2 | 17.7 | 31.7 |
13 | 1:10 | GSEA | AVG | 79.1 | 76.4 | 16.9 | 31.9 |
14 | 1 | SAM-GS | None | 78.3 | 76.0 | 15.3 | 26.3 |
15 | 1 | Global | SetSig | 77.5 | 75.9 | 15.1 | 23.5 |
16 | 1 | GSEA | None | 76.7 | 75.6 | 16.3 | 29.5 |
17 | baseline (all genes used) | 75.5 | 76.6 | 18.4 | 33.5 | ||
18 | 1 | SAM-GS | SetSig | 75.0 | 74.7 | 14.2 | 18.9 |
19 | 1 | Global | AVG | 72.7 | 73.8 | 17.6 | 31.1 |
20 | 1:10 | SAM-GS | AVG | 72.5 | 73.8 | 15.9 | 26.0 |
21 | 1 | GSEA | SetSig | 70.2 | 72.6 | 17.0 | 26.8 |
22 | 1 | GSEA | AVG | 69.6 | 68.1 | 12.8 | 22.4 |
23 | 1 | GSEA | SVD | 69.5 | 71.9 | 16.3 | 28.2 |
24 | 1 | SAM-GS | SVD | 69.0 | 69.5 | 15.7 | 21.3 |
25 | 1 | SAM-GS | AVG | 67.3 | 67.0 | 11.4 | 15.5 |