Table 3 Examples of contiguous single gene expansions in five Streptomyces genomes.
From: Genome plasticity and systems evolution in Streptomyces
Stains | Family | Duplications | Function description |
|---|---|---|---|
S. coelicolor (11)a | strep1777 | SCO3466-3467 | Transposase |
| Â | strep2302 | SCO2906-2907 | PTS transmembrane protein |
| Â | strep2354 | SCO5663-5664 | Integral membrane protein |
| Â | strep5410 | SCO7774-7775 | Secreted protein |
| Â | strep6870 | SCO7791-7791a | Secreted oxidoreductase |
| Â | strep8395 | SCO0445-0446 | Secreted protein |
S. avermitilis (5) | strep8429 | SAV576-577 | TetR family transcriptional regulator |
| Â | strep2207 | SAV5346-5349 | Hypothetical protein |
S. bingchenggensis (15) | strep1002 | 14 groups | DNA integration |
| Â | strep1016 | SBI_09333-09334 | Transposase |
| Â | strep2168 | SBI_06671-06672 | Integral membrane protein |
| Â | strep2332 | SBI_06321-06322 | Regulatory protein |
| Â | strep2438 | SBI_04627-04628 | Regulatory protein |
| Â | strep5446 | SBI_02610-02611 | Cytochrome P450 family protein |
| Â | strep5448 | SBI_02692-02693 | Beta galactosidase |
| Â | strep8479 | SBI_01576-01577 | Transcriptional regulator, CdaR |
| Â | strep8554 | SBI_09566-09567 | NmrA family protein |
S. griseus (5) | strep2491 | SGR_2433-2434, SGR_5023-5024 | Hypothetical protein |
| Â | strep7090 | SGR_4733-4734 | Membrane transporter |
| Â | strep8591 | SGR_812-813 | FAD-dependent oxidoreductase |
| Â | strep8821 | SGR_605-606 | Putative enediyne biosynthesis protein |
S. scabiei (10) | strep1854 | SCAB_42921-42931 | Transposase |
| Â | strep5499 | SCAB_23621-23631 | Oxidoreductase |
| Â | strep5512 | SCAB_42581-42591 | Integrin-like protein |
| Â | strep7062 | SCAB_69611-69621 | Extracellular substrate-binding protein |
| Â | strep7064 | SCAB_48881-48891 | GntR family transcriptional regulator |
| Â | strep8654 | SCAB_81001-81011 | IclR family transcriptional regulator |