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Table 1 Event types and their arguments for the GE task.

From: The Genia Event and Protein Coreference tasks of the BioNLP Shared Task 2011

Event Type Primary Argument Secondary Argument
Gene_expression Theme(Protein)  
Transcription Theme(Protein)  
Protein_catabolism Theme(Protein)  
Phosphorylation Theme(Protein) Site(Entity)
Localization Theme(Protein) AtLoc(Entity), ToLoc(Entity)
Binding Theme(Protein)+ Site(Entity)+
Regulation Theme(Protein/Event), Cause(Protein/Event) Site(Entity), CSite(Entity)
Positive_regulation Theme(Protein/Event), Cause(Protein/Event) Site(Entity), CSite(Entity)
Negative_regulation Theme(Protein/Event), Cause(Protein/Event) Site(Entity), CSite(Entity)
  1. The type of each filler entity is specified in parenthesis. Arguments that may be filled more than once per event are marked with "+".