Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011

BMC Bioinformatics

Table 8 Teams, ranks and system descriptions

Team	Tasks (rank)	Organization	System descriptions
FAUST	EPI (2), ID (1)	3 NLP researchers	Riedel et al. [90], McClosky et al. [108]
UTurku	EPI (1), ID (5), REL(1)	1 bioinformatician	Björne et al. [93, 109, 110]
VIBGhent	REL(2)	1 NLP and 1 machine learning researcher, 1 bioinformatician	Van Landeghem et al. [101, 111]
UMass	EPI (4), ID (2)	1 NLP researcher	Riedel et al. [112], Riedel and McCallum [92, 113]
MSR-NLP	EPI (3)	1 software engineer, 3 NLP researchers	Quirk et al. [94]
Stanford	EPI (5), ID (3)	3 NLP researchers	McClosky et al. [91, 114]
ConcordU	EPI (7), ID (4), REL(3)	2 NLP researchers	Kilicoglu and Bergler [100, 115, 116]
CCP-BTMG	EPI (6)	3 bioinformaticians	Liu et al. [117]
PNNL	ID (6)	1 computer scientist, 1 NLP researcher, 2 bioinformaticians	McGrath et al. [95]
PredX	ID (7)	1 computer scientist, 1 NLP researcher	-
HCMUS	REL (4)	6 linguists	Quang et al. [102]

Profiles of teams, tasks participated in (with ranks), and references to published system descriptions.

ISSN: 1471-2105