Skip to main content

Table 2 Stacking experiments on Genia

From: Combining joint models for biomedical event extraction

System

Simple

Binding

Regulation

Overall

UMass

74.7

47.7

42.8

54.8

Stanford (1N)

71.3

44.2

35.6

49.9

Stanford (1P)

70.7

42.6

34.6

49.1

Stanford (2N)

69.0

40.5

30.8

46.5

Stanford (2P)

72.0

40.3

35.4

49.5

Stanford (1N, reranked)

71.7

46.9

35.4

50.2

Stanford (1P, reranked)

70.6

44.5

35.5

49.4

Stanford (2N, reranked)

70.2

44.6

38.2

47.9

Stanford (2P, reranked)

71.1

47.8

35.9

50.5

Stanford (all, reranked)

71.6

48.1

35.9

50.7

UMass←Stanford (all) (= FAUST)

76.9

43.5

44.0

55.9

UMass←Stanford (1N)

76.4

45.1

43.8

55.6

UMass←Stanford (1P)

75.8

43.1

44.6

55.7

UMass←Stanford (2N)

74.9

42.8

43.8

54.9

UMass←Stanford (2P)

75.7

46.0

44.1

55.7

UMass←Stanford (all, anchors)

76.4

41.2

43.1

54.9

UMass←Stanford (all, arguments)

76.1

41.7

43.6

55.1

UMass←Stanford (all) without novel events

77.3

44.5

43.5

56.2

  1. BioNLP F1 scores on the development section of the Genia track (task 1) for several event categories and overall F1. The best scores from each column are bolded.