Cancer module genes ranking using kernelized score functions

BMC Bioinformatics

Table 2 Time requirements of the compared methods.

Method	FI	*HumanNet*	Integrated network
S _AV	200	196	195
S _NN	202	212	203
S _kNN	391	401	400
GeneMANIA	1906	1981	3321
Zhou	62875	63005	58420
LabelProp	609545	610520	606420

Time required for each of the compared methods for the realization of the entire experiment (ranking of 8499 genes according to their likelihood to belong to 298 CM, 5-folds CV repeated 5 times). Times are expressed in seconds.

ISSN: 1471-2105