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Table 3 Results obtained on the T1D and T2D datasets

From: Hierarchical Naive Bayes for genetic association studies

  

10 Folds CV

Independent Test

Study

Model

CA

AUC

CA

AUC

T1D

HNB

0.70 [0.67-0.73]

0.80 [0.78-0.82]

0.71

0.79

 

NB

0.70 [0.67-0.72]

0.79 [0.76-0.81]

0.68

0.78

T2D

HNB

0.83 [0.81-0.85]

0.92 [0.89-0.93]

0.57

0.57

 

NB

0.81 [0.80-0.84]

0.90 [0.89-0.92]

0.55

0.56

  1. CA, Median Classification Accuracy and 25% - 75% of the distribution; AUC, Median Area Under the Curve and 25% - 75% of the distribution. The 25% - 75% of the distribution are reported for results deriving from 10 Folds CV. The described parameters are reported for blocks defined using thresholds of LD corresponding to r2 ≥ 0.8
  2. Majority Classifier CA and AUC for 10 Folds CV and Independent test sets: 0.50.
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BMC Bioinformatics

ISSN: 1471-2105

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