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Table 1 Number of overlapping genes between different data sources

From: PAGED: a pathway and gene-set enrichment database to enable molecular phenotype discoveries

 

OMIM

GAD

MSigDB

GeneSigDB

miRecords

HPD

HAPPI*

OMIM

9012

1862

3489

2792

231

2559

3849

GAD

 

7293

6821

6450

432

3202

4922

MSigDB

  

30525

17209

759

6229

10677

GeneSigDB

   

36791

900

5904

10395

miRecords

    

1395

443

725

HPD

     

12228

10512

HAPPI

      

21955

  1. * Only PPIs of over 3-star quality are considered here; to calculate the overlap, protein IDs from HAPPI have been first converted to gene symbols.
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BMC Bioinformatics

ISSN: 1471-2105

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