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Table 4 Top search results of gene-based search from microarray datasets

From: PAGED: a pathway and gene-set enrichment database to enable molecular phenotype discoveries

Gene-set Name

Hits

P value

FDR

Data Source

SABATES_COLORECTAL_ADENOMA_DN

58

4.57E-96

2.76E-10

MsigDB

Breast_Farmer05_3198genes_basal_apocrine_luminal

35

2.91E-13

2.76E-10

GeneSigDB

SABATES_COLORECTAL_ADENOMA_UP

34

1.62E-57

2.76E-10

MsigDB

Immune_Kong10_5640genes_ImmPort_ComprehensiveListofImmune-RelatedGenes

34

3.56E-08

2.76E-10

GeneSigDB

Leukemia_Pellegrini08_2692genes

32

1.28E-15

2.76E-10

GeneSigDB

Intestine_Vecchi07_1024genes

28

3.91E-23

2.76E-10

GeneSigDB

Viral_Buonomo11_5307genes

25

6.45E-05

0.000109

GeneSigDB

SMID_BREAST_CANCER_LUMINAL_B_DN

23

4.16E-19

2.76E-10

MsigDB

Lymphoma_Melendez05_4229genes

22

2.03E-06

2.76E-10

GeneSigDB

Colon_Kim04_235genes

21

5.18E-30

2.76E-10

GeneSigDB

Breast_Parker09_1918genes_IntrinsicGenes_Compilation

21

1.18E-08

2.76E-10

GeneSigDB