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Table 2 Example of the final output (fragment) table imported in Excel spreadsheet.

From: Computational workflow for analysis of gain and loss of genes in distantly related genomes

gene am ar br ca da ho lo mo ne sa tr ur sum Bilateria Basal
Aqu1.205579 1 1 1 0 0 0 0 1 1 0 1 0 7 TRUE TRUE
Aqu1.208671 1 0 1 1 0 0 0 0 1 1 0 1 7 TRUE TRUE
Aqu1.213232 1 1 1 0 0 1 0 0 0 1 1 1 8 TRUE TRUE
Aqu1.219112 1 0 1 0 0 0 0 0 0 0 0 1 4 TRUE TRUE
Aqu1.201795 1 0 0 1 0 0 0 0 0 1 0 1 5 TRUE TRUE
Aqu1.227071 1 0 0 1 0 0 0 0 0 1 0 1 5 TRUE TRUE
  1. Rows represent selected genes (representative instances of gene families) from all Animal Metagenome pool, columns mark occurrence of the given gene from this pool in a particular genome. The last two columns have logical expressions for such gene occurrence in any Bilateria and in any Basal Metazoa genomes. Abbreviations: am -- Amphimedon; ar -- Arabidopsis; br -- Branchiostoma; ca -- Capsaspora; da -- Daphnia; ho -- Homo; lo -- Lottia; mo -- Monosiga; ne -- Nematostella; pb -- Pleurobrachia; tr -- Trichoplax; ur -- Sea urchin (Strongylocentrotus).