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Table 3 The highest scored topologically significant proteins from gene expression and proteomics data for androgen-stimulated LNCaP prostate cancer cells

From: Knowledge-based analysis of proteomics data

Symbol

Entrez Gene ID

Description

p value

AAG11

2274

aging -associated gene 11

2.24E-19

CLS

6197

ribosomal protein S6 kinase, 90kDa, polypeptide 3

1.51E-18

CTNNB

1499

catenin (cadherin -associated protein), beta 1, 88kDa

5.45E-17

CCND2

894

cyclin D2

3.74E-16

FLJ21396

23132

RAD54 -like 2

5.26E-16

AIS

367

androgen receptor

1.36E-15

DAB2

1601

mitogen -responsive phosphoprotein

1.55E-15

ABP -280

2316

filamin A, alpha

3.89E-15

ACH

2261

fibroblast growth factor receptor 3

1.2E-14

RAD9

5883

RAD9 homolog

1.31E-14

Symbol

Entrez Gene ID

Description

p value

MYC

4609

myc proto-oncogene protein

2.15E-08

HIRS-1

3667

insulin receptor substrate 1

1.85E-07

BCL2

596

B-cell CLL/lymphoma 2

4.21E-07

INSRR

3645

IR-related receptor

4.34E-07

MGC26306

9414

tight junction protein 2 (zona occludens 2)

4.38E-07

GCCR

2908

glucocorticoid receptor

5.98E-07

IRF-1

3659

interferon regulatory factor-1

1.01E-06

SREBF1

6720

sterol regulatory element binding transcription factor 1

1.06E-06

FLJ12859

23528

ZNP-99 transcription factor

1.1E-06

ETV3

2117

ets variant gene 3, ETS family transcriptional repressor

1.12E-06

  1. The top table contains Entrez Gene IDs, gene symbol, gene names and topological scoring test p-values for top 10 topologically significant proteins identified for overexpressed gene list. The bottom table contains the same information for 10 top topologically significant proteins identified for overexpressed protein list.