Elucidating gene signatures that control the circadian rhythm in cyanobacteria using bioinformatics methods

BMC Bioinformatics

Table 1 Signature genes expressed during the day.

Function	Genes
Photosynthesis Cluster
Photosystem II	psbD2, psbO, psbA1, psbA3, psbF, psbE, psbY, psbA4, psbA1, psbA2, petA*,
Cytochrome Family	psbV, petB*, petJ
Ferredoxin Type	petF1, petF5,
Carbon Fixation	glcD, glcE, glcF, rbcL
Thiamine Biosynthesis	thiC, thiE, thiL, thiOG
Pantothenate Biosynthesis	panB, panD
CoA biosynthesis	ilvB
Fatty Acid Biosynthesis	accD, fabl, fabG
Amino acyl – tRNA biosynthesis	cysS1, cysS2, serS, pheS, pheT, thrS1, thrS2, proS
DNA replication	ligA, polA, rnhA*
Glyoxylate and dicarboxylate metabolism	purU, glcD, folD, glcE, glcF
Butanoate Metabolism	pdhA, ilvN, ilvB, gabD

ISSN: 1471-2105