Table 2 Comparison of overlapping gene sets generated by GSEA and GSEA-AF
From: THINK Back: KNowledge-based Interpretation of High Throughput data
Methods | Overlap Gene Sets (FDR < 0.05) | Cancer Related Gene Sets | Name of Gene Sets |
|---|---|---|---|
GSEA | 7 | 3 | Proteasome, Cell cycle, Biosynthesis of steroids |
GSEA-AF | 9 | 4 | Proteasome, Cell cycle, Biosynthesis of steroids, Oxidative phosphorylation |