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Table 2 Minimum Root Mean Squared Error (RMSE) on the MFEP specific and restricted subset with respect to gene ontologies

From: Learning pair-wise gene functional similarity by multiplex gene expression maps

Ontology

RMSE on specific subset

RMSE on restricted subset

 

Training data

Control data

Training data

Control data

Cellular Component

0.3287

0.3475

0.2207

0.2829

Molecular Function

0.3928

0.4075

0.2030

0.3582

Biological Process

0.3699

0.3808

0.2371

0.3539

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BMC Bioinformatics

ISSN: 1471-2105

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