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Table 4 One-to-one resonance assignment results from PeakWalker input

From: Combining automated peak tracking in SAR by NMR with structure-based backbone assignment from 15N-NOESY

Protein

UbcH5B

Histone H1

hBclXL

hBclXL*

Num Correct

119.5

66.2

101.9

99.8

Num Correct Range

119-120

65-67

101-103

99-101

Acc (%)

98.0

94.7

95.6

94.5

Acc Range (%)

97.5-98.4

92.9-95.7

94.4-97.2

93.5-95.2

Num HN - HN Correct

157

114

116.1

118.3

Acc HN - HN (%)

92.7

90.9

90.0

86.3

Num HN - Hα Correct

168.2

104.9

128.6

0

Acc HN - Hα (%)

75.6

65.4

63.1

0

  1. The input many-to-one mappings for hBclXL had a 96.7% accuracy with 116 correct and 1.3 residues per peak on average. The input for UbcH5B had values of 98.3%, 120, and 1.2. The input for histone H1 had values of 98.8%, 85, and 1.3. The results are averages over 10 trials, where each trial is a different NOESY simulation. The unambiguous reference mapping was used to measure the accuracy for histone H1. The NOE assignment accuracy for each contact type is defined as the percentage of the number of contacts of the given type that is assigned to the correct NOESY peak. * The last column gives the results of using only HN-HN contacts for hBclXL.