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Table 10 Table of pathogenic SNPs in Homo sapiens from dbSNP and covering fuzzy tandem repeats.

From: Tandem repeats discovery service (TReaDS) applied to finding novel cis-acting factors in repeat expansion diseases

Gene/Protein

Seq length

Num. path. SNP

Covered by FTR

FTR

FZD6

3806

2

0

-

NSDHL

1581

2

0

-

GJB1

1623

10

0

-

IDS

1437

5

0

-

IDS

5832

2

0

-

SLC16A2

4396

2

0

-

NSDHL

1581

2

0

-

ABCB7

2404

2

0

-

TIMM8A

1459

2

0

-

UBA1

3544

3

0

-

FLNA

8533

2

2

[1000- 3946]

MED12

6985

1

0

-

PRPS1

2156

4

0

-

ARSE

2220

4

0

-

  1. Table of pathogenic SNPs in Homo sapiens from dbSNP and covering fuzzy tandem repeats. The table reports: gene/protein code, sequence length, number of pathogenic SNP, number of pathogenic SNPs covered by FTR, FTR [Begin - End] if existing.
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BMC Bioinformatics

ISSN: 1471-2105

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