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Table 6 Table of covering fuzzy tandem repeats for polyalanine TR.

From: Tandem repeats discovery service (TReaDS) applied to finding novel cis-acting factors in repeat expansion diseases

Gene code Seq length Cover TR-beg TR-end FTR-beg FTR-end FTR/TR Cover/Length
FOXL2 9900 5000 6079 6115 6082 6258 4.888 0.505
ZIC2 11701 677 8385 8429 8304 8534 5.227 0.057
PHOX2B 11889 187 7940 7993 7830 8015 3.490 0.015
ARX 19255 1039 7252 7299 7199 7424 4.787 0.053
SOX3 9074 1114 5700 5744 5584 6191 13.795 0.122
RUNX2 10000 (*) 766 99435 99485 99310 99488 3.560 0.076
HOXA13 10227 658 5375 5428 5328 5493 3.113 0.064
HOXD13 10135 279 5256 5300 5025 5304 6.340 0.027
PABPN1 12976 1337 6286 6303 6278 6405 7.470 0.103
  1. Table of covering fuzzy tandem repeats for polyalanine TR. The table reports: gene code, sequence length, length of the region covered by FTRs, TR expansion begin and TR expansion end, FTR begin and FTR end, ratio of FTR length over TR length, ratio of region covered by FTRs over total sequence length. (*) indicates that a subsequence has been analyzed.