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Table 1 MGMR vs. SEQEM error at 100 iterations on SEQEM-A and SEQEM-B data sets

From: MGMR: leveraging RNA-Seq population data to optimize expression estimation

 

SEQEM-A sampling

SEQEM-B sampling

 

SEQEM

MGMR

SEQEM

MGMR

 

Error

SD

Error

SD

Error

SD

Error

SD

E

1.27

1 * 10-2

1.03

0.14

1.50

0.70

0.82

6 * 10-3

χ2

0.66

2 * 10-3

0.22

4 * 10-3

0.69

0.05

0.27

1 * 10-4

KL

0.29

7 * 10-4

0.14

1 * 10-4

0.18

2 * 10-4

0.17

1 * 10-4

  1. These data sets were derived from SEQEM and MGMR(SEQEM) estimates, respectively, on 20 YRI samples. (E: relative error rate; χ2: Chi-squared error; KL: Kullback-Liebler divergence; SD: standard deviation)
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BMC Bioinformatics

ISSN: 1471-2105

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