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Table 1 Comparison of Genovar with previously reported CNV analysis tools

From: Genovar: a detection and visualization tool for genomic variants

Plat-

form

Module

CGHPRO

VAMP

ISACGH

MD-SeeGH

SIGMA2

CGcgh

CGHweb

CHESS

SnoopCGH

CNA-Reporter

SEURAT

Wavi-CGH

FISH Oracle

CNVAS

GENOVAR

 

Year

2005

2006

2007

2008

2008

2008

2008

2009

2009

2010

2010

2010

2011

2011

2011

 

CNV detection

O

 

O

O

O

O

O

O

O

O

O

O

 

O

O

CGH

CNV visualization

O

O

O

O

O

O

O

O

O

O

O

O

O

O

O

 

CNV quality control

O

             

O

 

Annotation

O

 

O

O

O

O

O

O

O

O

O

O

O

O

O

 

CNV detection

              

O

NGS

CNV visualization

              

O

 

CNV quality control

              

O

 

Annotation

              Â