From: Prediction of protein-protein interactions between viruses and human by an SVM model
HCV protein | Known HHCV | Initial candidates of HHCV by BLAST search | Predicted candidates of HHCV by SVM | Refined candidates of HHCV with GO |
---|---|---|---|---|
core | 118 | 732 | 225 | 71 |
E1 | 16 | 150 | 28 | 9 |
E2 | 29 | 182 | 33 | 10 |
F | 10 | 206 | 57 | 12 |
NS2 | 11 | 176 | 42 | 8 |
NS3 | 298 | 1,599 | 495 | 195 |
NS4A | 7 | 114 | 33 | 10 |
NS4B | 1 | 1 | 1 | 1 |
NS5A | 152 | 499 | 123 | 72 |
NS5B | 36 | 384 | 92 | 51 |
p7 | 17 | 166 | 51 | 17 |
Total | 695 | 4,209 | 1,180 | 456 |