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Figure 3 | BMC Bioinformatics

Figure 3

From: RuleBender: integrated modeling, simulation and visualization for rule-based intracellular biochemistry

Figure 3

Compartmental Contact Map. Contact Map with molecule compartment hierarchy (extracellular, cytoplasmic, nucleus etc). The saturation of the convex hull encompassing a compartment indicates the hierarchical structure of the compartments; the outermost compartment is colored the lightest blue. All the members of a compartment can be moved as a whole unit to get a clear view of the hierarchical structure.

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