Table 2 Top 10 two-way gene predctor interaction results of the between-gene MDR analysis step and SNP level interaction results
Rank | Gene combinations | Number of SNPs | Test BA | SNP level | |
|---|---|---|---|---|---|
Interaction order | Test BA | ||||
1 | ERG, NEBL | 4, 4 | 0.5833 | 8 | 0.6674 |
2 | ERG, GABBR2 | 4, 4 | 0.5832 | 8 | 0.6558 |
3 | CHST11, ERG | 1, 4 | 0.5821 | 5 | 0.6004 |
4 | CHST11, KATNAL1 | 1, 4 | 0.5820 | 5 | 0.5910 |
5 | TIAM2, ERG | 4, 4 | 0.5812 | 8 | 0.6585 |
6 | COLEC12, STARD13 | 4, 4 | 0.5809 | 8 | 0.6532 |
7 | SHANK2, MUC16 | 4, 4 | 0.5808 | 8 | 0.6536 |
8 | KLHL29, GRIN2B | 4, 4 | 0.5808 | 8 | 0.6483 |
9 | CHST11, KLHL29 | 1, 4 | 0.5807 | 5 | 0.5947 |
10 | CHST11, NIBP | 1, 4 | 0.5805 | 5 | 0.5948 |