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Table 2 Characteristics of comparative graph

From: Generalized adjacency and the conservation of gene clusters in genetic networks defined by synthetic lethals

cluster size

graph

adjacency parameter*

  

1-adj.

2-adj.

3-adj.

2 genes

yeast

54

253

746

 

random

4.5

99

581

 

fixed common edges

53

217

767

3 genes

yeast

104

1,668

12,321

 

random

1.2

442

8,909

 

fixed common edges

101

1,292

12,185

4 genes

yeast

136

10,417

159,167

 

random

0.3

1,741

104,339

 

fixed common edges

132

7,567

160,821

  1. Simulations showing heightened numbers of common 2-gene, 3-gene clusters 4-gene clusters under (2,2)-adjacency in the yeast network compared to random graphs.
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BMC Bioinformatics

ISSN: 1471-2105

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