Figure 1
From: LASAGNA: A novel algorithm for transcription factor binding site alignment
An illustration of LASAGNA with K a =0 . (a) Thealigned binding sites in A and the unaligned ones inU. The shortest binding site is in bold. (b) Thesequence logo [48] of the PSSM built from A aligns with the augmentedsequence - - - - - - - - - TTTCCCGCCAA - - - - - - - - -, where thematched portion is in bold. (c) The updated A andU, where the newly added binding site is in bold.