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Table 1 List of gene set libraries ranked by number of terms

From: Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

   Gene Mean genes per
Gene-set library Terms coverage term
Down-regulated CMAP 6100 8695 100
Up-regulated CMAP 6100 11251 100
HMDB Metabolites 3906 3729 47.1495
GeneSigDB 2139 23729 126.6947
Human CoR Complexome 1796 10231 158.2778
CORUM 1673 2741 4.6934
Cancer Cell Line Encyclopedia 967 15797 176.2079
GO Biological Process 941 7683 78.4676
MSigDB Computational 858 10061 106.4207
Genome Browser PWMs 615 13362 275.1447
MGI Mammalian Phenotype Top 4 476 10496 201.7101
Kinase Enrichment Analysis KEA 474 4533 36.7089
ENCODE TF ChIP-seq 434 19851 1064.055
GO Molecular Function 402 8469 121.8284
Chromosome Location 386 32740 84.8187
PPI Hub Proteins 385 16487 247.2286
Histone Modifications ChIP-seq 356 21921 1232.129
TRANSFAC/JASPAR PWMs 335 42887 1249.63
Pfam InterPro Domains 311 7588 35.3408
BioCarta Pathways 249 1295 17.6506
ChIP Enrichment Analysis ChEA 240 42574 1455.7
microRNA TargetScan 222 7504 154.6036
GO Cellular Component 205 7325 172.1268
KEGG Pathways 200 4128 48.44
WikiPathways 199 2854 38.8191
MSigDB Oncogenic Signatures 189 11250 165.709
OMIM Expanded 187 2178 88.9198
Mouse Gene Atlas 96 20686 660.1354
NCI-60 Cancer Cell Lines 93 12232 343.3333
OMIM Disease 90 1759 25.0667
VirusMINT 85 851 14.8824
Human Gene Atlas 84 15381 449.7619
SILAC Phosphoproteomics 84 7732 341.869
Reactome Pathways 78 3185 72.5128
MGI Mammalian Phenotype Top 3 71 10406 717.4366
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