Example FUSIM output. Example of simulated fusion transcripts generated by FUSIM. (a) Text output of two simulated fusion transcripts NPS-RPL38 (inter-chromosome hybrid fusion) and MMP14-LRP10 (readthrough fusion). (b) FASTA output of the raw sequence data showing fusion junctions. (c) Results of BLAT search using the FASTA sequences in (b) validating FUSIM output. The black square boxes represent the exons from RefSeq genes and the colored boxes represent the exons from the gene fusion generated by FUSIM.