TY - JOUR AU - Meng, J. AU - Rosenwasser, L. J. PY - 2010 DA - 2010// TI - Unraveling the Genetic Basis of Asthma and Allergic Diseases JO - Allergy Asthma Immunol Res VL - 2 UR - https://doi.org/10.4168/aair.2010.2.4.215 DO - 10.4168/aair.2010.2.4.215 ID - Meng2010 ER - TY - JOUR AU - Carvalho, B. AU - Bengtsson, H. AU - Speed, T. P. AU - Irizarry, R. A. PY - 2007 DA - 2007// TI - Exploration, normalization, and genotype calls of high density oligonucleotide SNP array data JO - Biostatistics VL - 8 UR - https://doi.org/10.1093/biostatistics/kxl042 DO - 10.1093/biostatistics/kxl042 ID - Carvalho2007 ER - TY - JOUR AU - Teo, Y. Y. AU - Inouye, M. AU - Small, K. S. AU - Gwilliam, R. AU - Deloukas, P. AU - Kwiatkowski, D. P. AU - Clark, T. G. PY - 2007 DA - 2007// TI - A genotype calling algorithm for the Illumina BeadArray platform JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm443 DO - 10.1093/bioinformatics/btm443 ID - Teo2007 ER - TY - JOUR AU - Balding, D. PY - 2006 DA - 2006// TI - A tutorial on statistical methods for population association studies JO - Nat Rev Genet VL - 7 UR - https://doi.org/10.1038/nrg1916 DO - 10.1038/nrg1916 ID - Balding2006 ER - TY - JOUR AU - Gordon, D. AU - Finch, S. J. PY - 2005 DA - 2005// TI - Factors affecting statistical power in the detection of genetic association JO - J Clin Invest VL - 115 UR - https://doi.org/10.1172/JCI24756 DO - 10.1172/JCI24756 ID - Gordon2005 ER - TY - JOUR AU - Campbell, C. D. AU - Ogburn, E. L. AU - Lunetta, K. L. AU - Lyon, H. N. AU - Freedman, M. L. AU - Groop, L. C. AU - Altshuler, D. AU - Ardlie, K. G. AU - Hirschhorn, J. N. PY - 2005 DA - 2005// TI - Demonstrating stratification in a European American population JO - Nat Genet VL - 37 UR - https://doi.org/10.1038/ng1607 DO - 10.1038/ng1607 ID - Campbell2005 ER - TY - JOUR AU - Xu, H. AU - Sarkar, B. AU - George, V. PY - 2009 DA - 2009// TI - A new measure of population structure using multiple single nucleotide polymorphisms and its relationship with FST JO - BMC Res Notes VL - 2 UR - https://doi.org/10.1186/1756-0500-2-21 DO - 10.1186/1756-0500-2-21 ID - Xu2009 ER - TY - JOUR AU - Li, Q. AU - Yu, K. PY - 2008 DA - 2008// TI - Improved correction for population stratification in genomewide association studies by identifying hidden population structures JO - Genet Epidemiol VL - 32 UR - https://doi.org/10.1002/gepi.20296 DO - 10.1002/gepi.20296 ID - Li2008 ER - TY - JOUR AU - Devlin, B. AU - Roeder, K. PY - 1999 DA - 1999// TI - Genomic control for association studies JO - Biometrics VL - 55 UR - https://doi.org/10.1111/j.0006-341X.1999.00997.x DO - 10.1111/j.0006-341X.1999.00997.x ID - Devlin1999 ER - TY - JOUR AU - Price, A. L. AU - Patterson, N. J. AU - Plenge, R. M. AU - Weinblatt, M. E. AU - Shadick, N. A. AU - Reich, D. PY - 2006 DA - 2006// TI - Principal components analysis corrects for stratification in genome-wide association studies JO - Nat Genet VL - 38 UR - https://doi.org/10.1038/ng1847 DO - 10.1038/ng1847 ID - Price2006 ER - TY - JOUR AU - Pritchard, J. K. AU - Stephens, M. AU - Rosenberg, N. A. AU - Donnelly, P. PY - 2000 DA - 2000// TI - Association mapping in structured populations JO - Am J Hum Genet VL - 67 UR - https://doi.org/10.1086/302959 DO - 10.1086/302959 ID - Pritchard2000 ER - TY - JOUR AU - Tse, K. P. AU - Su, W. H. AU - Chang, K. P. AU - Tsang, N. M. AU - Yu, C. J. PY - 2009 DA - 2009// TI - Genome-wide association study reveals multiple nasopharyngeal carcinoma-associated loci within the HLA region at chromosome 6p21.3 JO - Am J Hum Genet VL - 85 UR - https://doi.org/10.1016/j.ajhg.2009.07.007 DO - 10.1016/j.ajhg.2009.07.007 ID - Tse2009 ER - TY - JOUR AU - Bishop, D. T. AU - Demenais, F. AU - Iles, M. M. AU - Harland, M. AU - Taylor, J. C. PY - 2009 DA - 2009// TI - Genome-wide association study identifies three loci associated with melanoma risk JO - Nat Genet VL - 41 UR - https://doi.org/10.1038/ng.411 DO - 10.1038/ng.411 ID - Bishop2009 ER - TY - JOUR AU - Zhang, Z. AU - Ersoz, E. AU - Lai, C. -. Q. AU - Todhunter, R. J. AU - Tiwari, H. K. PY - 2010 DA - 2010// TI - Mixed linear model approach adapted for genome-wide association studies JO - Nat Genet VL - 42 UR - https://doi.org/10.1038/ng.546 DO - 10.1038/ng.546 ID - Zhang2010 ER - TY - JOUR AU - Kang, H. M. AU - Sul, J. H. AU - Service, S. K. AU - Zaitlen, N. A. AU - Kong, S. -. Y. PY - 2010 DA - 2010// TI - Variance component model to account for sample structure in genome-wide association studies JO - Nat Gene VL - 42 UR - https://doi.org/10.1038/ng.548 DO - 10.1038/ng.548 ID - Kang2010 ER - TY - JOUR AU - Croux, C. AU - Filzmoser, P. AU - Oliveira, M. R. PY - 2007 DA - 2007// TI - Algorithms for Projection-Pursuit Robust Principal Component Analysis JO - Chemometr Intell Lab VL - 87 UR - https://doi.org/10.1016/j.chemolab.2007.01.004 DO - 10.1016/j.chemolab.2007.01.004 ID - Croux2007 ER - TY - JOUR AU - Egan, W. J. AU - Morgan, S. L. PY - 1998 DA - 1998// TI - Outlier detection in multivariate analytical chemical data JO - Ana Chem VL - 79 UR - https://doi.org/10.1021/ac970763d DO - 10.1021/ac970763d ID - Egan1998 ER - TY - BOOK AU - Kaufman, L. AU - Rousseeuw, P. J. PY - 1990 DA - 1990// TI - Finding Groups in Data PB - Wiley CY - New York UR - https://doi.org/10.1002/9780470316801 DO - 10.1002/9780470316801 ID - Kaufman1990 ER - TY - JOUR AU - Tibshirani, R. AU - Walther, G. AU - Hastie, T. PY - 2001 DA - 2001// TI - Estimating the number of clusters in a data set via the gap statistic JO - J R Stat Soc Ser B VL - 2 UR - https://doi.org/10.1111/1467-9868.00293 DO - 10.1111/1467-9868.00293 ID - Tibshirani2001 ER - TY - JOUR AU - Croux, C. AU - Haesbroeck, G. AU - Rousseeuw, P. J. PY - 2002 DA - 2002// TI - Location adjustment for the minimum volume ellipsoid estimator JO - Statist Comput VL - 12 UR - https://doi.org/10.1023/A:1020713207683 DO - 10.1023/A:1020713207683 ID - Croux2002 ER - TY - JOUR AU - Rousseeuw, P. AU - VanDriessen, K. PY - 1999 DA - 1999// TI - A fast algorithm for the minimum covariance determinant estimator JO - Technometrics VL - 41 UR - https://doi.org/10.1080/00401706.1999.10485670 DO - 10.1080/00401706.1999.10485670 ID - Rousseeuw1999 ER - TY - JOUR AU - Li, G. AU - Chen, Z. PY - 1985 DA - 1985// TI - Projection-Pursuit Approach to Robust Dispersion Matrices and Principal Components: Primary Theory and Monte Carlo JO - J Am Stat Assoc VL - 80 UR - https://doi.org/10.1080/01621459.1985.10478181 DO - 10.1080/01621459.1985.10478181 ID - Li1985 ER - TY - JOUR AU - Croux, C. AU - Ruiz-Gazen, A. PY - 2005 DA - 2005// TI - High Breakdown Estimators for Principal Components: The Projection-Pursuit Approach Revisited JO - J Multivariate Anal VL - 95 UR - https://doi.org/10.1016/j.jmva.2004.08.002 DO - 10.1016/j.jmva.2004.08.002 ID - Croux2005 ER - TY - JOUR AU - Hubert, M. AU - Rousseeuw, P. J. AU - Vanden Branden, K. PY - 2005 DA - 2005// TI - ROBPCA: A New Approach to Robust Principal Component Analysis JO - Technometrics VL - 47 UR - https://doi.org/10.1198/004017004000000563 DO - 10.1198/004017004000000563 ID - Hubert2005 ER - TY - JOUR AU - Hubert, M. AU - Van Driessen, K. PY - 2004 DA - 2004// TI - Fast and Robust Discriminant Analysis JO - Comput Stat Data Anal VL - 45 UR - https://doi.org/10.1016/S0167-9473(02)00299-2 DO - 10.1016/S0167-9473(02)00299-2 ID - Hubert2004 ER - TY - JOUR AU - Wilson, E. B. AU - Hilferty, M. M. PY - 1931 DA - 1931// TI - The distribution of chi-squared JO - Proc Natl Acad Sci VL - 17 UR - https://doi.org/10.1073/pnas.17.12.684 DO - 10.1073/pnas.17.12.684 ID - Wilson1931 ER - TY - JOUR AU - Todorov, V. AU - Filzmoser, P. PY - 2009 DA - 2009// TI - An Object Oriented Framework for Robust Multivariate Analysis JO - J Stat Softw VL - 32 UR - https://doi.org/10.18637/jss.v032.i03 DO - 10.18637/jss.v032.i03 ID - Todorov2009 ER - TY - JOUR AU - Tracy, C. A. AU - Widom, H. PY - 1994 DA - 1994// TI - Level-spacing distributions and the airy kernel JO - Commun Math Phys VL - 159 UR - https://doi.org/10.1007/BF02100489 DO - 10.1007/BF02100489 ID - Tracy1994 ER - TY - JOUR AU - Gabriel, K. R. AU - Zamir, S. PY - 1979 DA - 1979// TI - Lower rank approximation of matrices by least squares with any choice of weights JO - Technometrics VL - 21 UR - https://doi.org/10.1080/00401706.1979.10489819 DO - 10.1080/00401706.1979.10489819 ID - Gabriel1979 ER - TY - JOUR AU - Liu, L. AU - Hawkins, D. AU - Ghost, S. AU - Young, S. S. PY - 2003 DA - 2003// TI - Robust Singular Value Decomposition Analysis of Microarray Data JO - Proc Natl Acad Sci VL - 100 UR - https://doi.org/10.1073/pnas.1733249100 DO - 10.1073/pnas.1733249100 ID - Liu2003 ER - TY - JOUR AU - Holm, S. PY - 1979 DA - 1979// TI - A Simple Sequentially Rejective Bonferroni Test Procedure JO - Scandinavian J of Stat VL - 6 ID - Holm1979 ER - TY - JOUR AU - Benjamini, Y. AU - Hochberg, Y. PY - 1995 DA - 1995// TI - Controlling the false discovery rate-a practical and powerful approach to multiple testing JO - J R Stat Soc Ser B VL - 57 ID - Benjamini1995 ER - TY - JOUR AU - Purcell, S. AU - Neale, B. AU - Todd-Brown, K. AU - Thomas, L. AU - Ferreira, M. A. AU - Bender, D. AU - Maller, J. AU - Sklar, P. AU - de Bakker, P. I. AU - Daly, M. J. AU - Sham, P. C. PY - 2007 DA - 2007// TI - PLINK: a tool set for whole-genome association and population-based linkage analyses JO - Am J Hum Genet VL - 81 UR - https://doi.org/10.1086/519795 DO - 10.1086/519795 ID - Purcell2007 ER - TY - JOUR AU - Gregersen, P. K. AU - Silver, J. AU - Winchester, R. J. PY - 1987 DA - 1987// TI - The shared epitope hypothesis. An approach to understanding the molecular genetics of susceptibility to rheumatoid arthritis JO - Arthritis Rheum VL - 30 UR - https://doi.org/10.1002/art.1780301102 DO - 10.1002/art.1780301102 ID - Gregersen1987 ER - TY - JOUR AU - Newton, J. L. AU - Harney, S. M. AU - Wordsworth, B. P. AU - Brown, M. A. PY - 2004 DA - 2004// TI - A review of the MHC genetics of rheumatoid arthritis JO - Genes Immun VL - 5 UR - https://doi.org/10.1038/sj.gene.6364045 DO - 10.1038/sj.gene.6364045 ID - Newton2004 ER - TY - JOUR AU - Jawaheer, D. AU - Seldin, M. F. AU - Amos, C. I. AU - Chen, W. V. AU - Shigeta, R. PY - 2003 DA - 2003// TI - Screening the genome for rheumatoid arthritis susceptibility genes: a replication study and combined analysis of 512 multicase families JO - Arthritis Rheum VL - 48 UR - https://doi.org/10.1002/art.10989 DO - 10.1002/art.10989 ID - Jawaheer2003 ER - TY - JOUR AU - Irigoyen, P. AU - Lee, A. T. AU - Wener, M. H. AU - Li, W. AU - Kern, M. PY - 2005 DA - 2005// TI - Regulation of anticyclic citrullinated peptide antibodies in rheumatoid arthritis: contrasting effects of HLA-DR3 and the shared epitope alleles JO - Arthritis Rheum VL - 52 UR - https://doi.org/10.1002/art.21419 DO - 10.1002/art.21419 ID - Irigoyen2005 ER - TY - JOUR AU - Zhernakova, A. AU - Stahl, E. A. AU - Trynka, G. AU - Raychaudhuri, S. AU - Festen, E. A. PY - 2011 DA - 2011// TI - Meta- analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci JO - PLoS Genet VL - 7 UR - https://doi.org/10.1371/journal.pgen.1002004 DO - 10.1371/journal.pgen.1002004 ID - Zhernakova2011 ER - TY - JOUR AU - Stahl, E. A. AU - Raychaudhuri, S. AU - Remmers, E. F. AU - Xie, G. AU - Eyre, S. PY - 2010 DA - 2010// TI - Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk loci JO - Nat Genet VL - 42 UR - https://doi.org/10.1038/ng.582 DO - 10.1038/ng.582 ID - Stahl2010 ER - TY - JOUR AU - Gregersen, P. K. AU - Amos, C. I. AU - Lee, A. T. AU - Lu, Y. AU - Remmers, E. F. PY - 2009 DA - 2009// TI - REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis JO - Nat Genet VL - 41 UR - https://doi.org/10.1038/ng.395 DO - 10.1038/ng.395 ID - Gregersen2009 ER - TY - JOUR AU - Plenge, R. M. AU - Seielstad, M. AU - Padyukov, L. AU - Lee, A. T. AU - Remmers, E. F. PY - 2007 DA - 2007// TI - TRAF1-C5 as a risk locus for rheumatoid arthritis-a genomewide study JO - N Engl J Med VL - 357 UR - https://doi.org/10.1056/NEJMoa073491 DO - 10.1056/NEJMoa073491 ID - Plenge2007 ER - TY - JOUR AU - Price, A. L. AU - Zaitlen, N. A. AU - Reich, D. AU - Patterson, N. PY - 2010 DA - 2010// TI - New approaches to population stratification in genome-wide association studies JO - Nat Rev Genet VL - 11 UR - https://doi.org/10.1038/nrg2813 DO - 10.1038/nrg2813 ID - Price2010 ER -