Table 2 The detection FPR/TPR with different copy number c
From: CNV-TV: A robust method to discover copy number variation from short sequencing reads
c | CNV-seq | FREEC | SegSeq | CNV-TV1 | readDepth | CNVnator | EWT | CNV-TV2 |
|---|---|---|---|---|---|---|---|---|
0 | 3.4e-4/0.98 | 2.1e-3/1.00 | 4.8e-3/0.00 | 1.5e-3/0.99 | 4.0e-5/0.99 | 1.3e-4/0.99 | 3.4e-4/0.99 | 2.2e-4/0.99 |
1 | 0.0e-0/0.23 | 5.2e-4/0.99 | 4.4e-3/0.95 | 1.4e-3/0.98 | 3.0e-5/0.30 | 3.4e-4/0.95 | 2.5e-4/0.98 | 4.2e-4/0.98 |
3 | 1.4e-5/0.05 | 7.2e-4/0.97 | 4.7e-3/0.85 | 2.9e-3/0.98 | 1.9e-5/0.06 | 2.2e-4/0.92 | 2.8e-4/0.82 | 4.6e-4/0.99 |
6 | 3.5e-4/1.00 | 9.9e-4/1.00 | 4.9e-3/0.99 | 7.9e-4/0.99 | 3.1e-5/0.99 | 2.5e-5/0.99 | 1.3e-4/0.99 | 6.2e-5/0.99 |