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Table 5 Average distribution (in percentage) of F -scores of detected CNVs in the real data processing

From: CNV-TV: A robust method to discover copy number variation from short sequencing reads

F-score 0.0 0.1 0.1 0.2 0.2 0.3 0.3 0.4 0.4 0.5 0.5 0.6 0.6 0.7 0.7 0.8 0.8 0.9 0.9 1.0
CNV-seq 86.27 2.88 2.15 1.62 1.79 0.95 1.85 1.79 0.71 0.00
FREEC 85.25 4.28 2.43 1.79 1.51 1.19 1.48 0.90 1.17 0.00
readDepth 94.47 0.91 0.53 0.99 0.65 0.42 0.45 1.18 0.38 0.00
CNVnator 89.72 2.56 0.97 0.69 1.18 0.94 0.93 1.31 0.93 0.76
SegSeq 89.59 3.19 2.10 1.03 1.60 1.03 0.45 0.20 0.35 0.41
EWT 96.12 0.67 0.48 0.49 0.38 0.31 0.28 0.75 0.19 0.32
CNV-TV 83.71 3.13 2.20 1.39 1.74 2.57 0.74 2.43 1.57 0.49