Table 4 Number of differentially bound regions at 5% FDR; at T30, where technical replicates are available, the results are given both for the case where the joint model of replicates is used (first column) and for the case where the union of two separate analysis is used (CBPT301 versus p300T301 and CBPT302 versus p300T302, second column)

From: Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data