Bowtie | Bowtie2 | BWA | SOAP2 | MAQ | RMAP | GSNAP | Novoalign | mrsFAST | ||
---|---|---|---|---|---|---|---|---|---|---|
Mapped | Expected | 93.57 | 93.25 | 91.29 | 91.29 | 93.57 | 90.12 | 93.25 | 96.18 | 93.25 |
Actual | 93.43 | 85.54 | 91.29 | 91.29 | 92.92 | 82.53 | 93.25 | 96.02 | 93.25 | |
Error | 0.73 | 0.03 | ||||||||
Unmapped | Expected | 6.43 | 6.75 | 8.71 | 8.71 | 6.43 | 9.88 | 6.75 | 3.82 | 6.75 |
Actual | 6.25 | 6.68 | 8.32 | 6.83 | 5.08 | 8.29 | 3.66 | 3.81 | 6.62 | |
Error | 1.73 | 1.25 | 1.5 | 2.97 | ||||||
Reported mapped | 93.61 | 85.61 | 91.68 | 93.17 | 94.27 | 84.11 | 96.34 | 96.03 | 93.38 | |
Reported correct | 93.61 | 85.61 | 91.68 | 90.71 | 93.02 | 82.61 | 93.37 | 96.03 | 93.38 |