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Table 2 MITE digger processing of additional genome databases

From: MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements

Genome

Genome DB size (Mb)

Processing time

No. output entries

No. DB entries

No. false output entries

Brassica rapa

268

19.76

85

42919

4111

Solanum tuberosome

567

37.06

134

5832

6997

Solanum lycopersicum

716

57.97

113

7425

9134

Sorghum bicolor

652

21.35

227

6267

3946

Oryza sativa

388

15.44

332

3734

3071

Musa acuminata

383

12.57

28

3930

1992