Skip to main content

Table 8 Rate and MSE obtained by running the schemes proposed in [39] on the H. sapiens dataset

From: QualComp: a new lossy compressor for quality scores based on rate distortion theory

LogBinning

R

MSE

UniBinning

R

MSE

Truncating

R

MSE

60

0

1346.35

5

0.05

895.92

33

0.01

1346.35

40

0.72

684.87

10

0.07

680.27

44

0.05

895.87

30

0.31

99.59

20

0.10

538.43

60

0.39

119.04

20

0.84

143.35

30

0.11

494.93

   

10

1.07

27.80

40

0.13

413.58

   

5

1.44

4.95

60

0.15

375.73

   
   

70

0.17

339.76

   
   

80

0.19

305.66

   
   

90

0.19

305.66

   
  1. MSE obtained by the LogBinning, UniBinning and Truncating algorithms proposed in [39] for different parameters.
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us