BMC Bioinformatics

Table 8 Experimental results for IRMA network, reconstructed from ON dataset

From: Incorporating time-delays in S-System model for reverse engineering genetic networks

	Original network				Simplified network
Methods	S _n	S _p	P _r	F	S _n	S _p	P _r	F
TDSS (Best)	0.85	0.86	0.69	0.76	0.80	0.92	0.80	0.80
TDSS	0.80 ±	0.84 ±	0.64 ±	0.71 ±	0.76 ±	0.89 ±	0.75 ±	0.75 ±
(Avg ±StDev)	0.04	0.02	0.04	0.04	0.05	0.02	0.04	0.03
ALG [16]	0.77	0.27	0.27	0.40	0.80	0.42	0.36	0.50
REGARD [19]	0.69	0.83	0.60	0.64	0.70	0.75	0.54	0.61
BITGRN2 [24, 42]	0.63	1.00	1.00	0.77	0.67	1.00	1.00	0.80
TDARACNE [44]	0.63	0.88	0.71	0.67	0.67	0.90	0.80	0.73
ARACNE [7]	0.60	-	0.50	0.54	0.33	-	0.25	0.28
NIR & TSNI [45]	0.50	0.94	0.80	0.63	0.50	-	0.50	0.50
BANJO [43]	0.24	0.76	0.33	0.29	0.50	0.70	0.50	0.50

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ISSN: 1471-2105

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