BMC Bioinformatics

Table 9 Experimental results for IRMA network, reconstructed from OFF dataset

From: Incorporating time-delays in S-System model for reverse engineering genetic networks

	Original network				Simplified network
Methods	S _n	S _p	P _r	F	S _n	S _p	P _r	F
TDSS (Best)	0.85	0.81	0.65	0.73	1.00	0.92	0.83	0.91
TDSS	0.80 ±	0.83 ±	0.63 ±	0.70 ±	0.90 ±	0.87 ±	0.75 ±	0.81 ±
(Avg ±StDev)	0.04	0.02	0.03	0.02	0.07	0.03	0.06	0.06
ALG [16]	0.76	0.56	0.38	0.57	0.80	0.75	0.57	0.67
REGARD [19]	0.77	0.76	0.53	0.63	0.80	0.79	0.62	0.70
BITGRN2 [24, 42]	0.50	0.94	0.80	0.62	0.50	0.90	0.75	0.60
TDARACNE [44]	0.60	-	0.37	0.46	0.75	-	0.50	0.60
ARACNE [7]	0.33	-	0.25	0.28	0.60	-	0.50	0.54
NIR & TSNI [45]	0.38	0.88	0.60	0.47	0.50	0.90	0.75	0.60
BANJO [43]	0.38	0.88	0.60	0.46	0.33	0.90	0.67	0.44

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ISSN: 1471-2105

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