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Table 2 Key words used and selection of Pfam domains for protein vaccine candidate prediction

From: Jenner-predict server: prediction of protein vaccine candidates (PVCs) in bacteria based on host-pathogen interactions

Sr. No. Key word used for PFam domain search No of domain hits No of selected domains* Reference
1. Adhesin 166 96 19
2. Choline binding protein 29 12 20
3. Bacterial extracellular solute-binding protein 36 8 21
4. Porin 66 46 22
5. Invasin 30 25 23
6. Fibronectin-binding protein 50 25 24
7. Transferrin-binding protein 24 6 25
8. Virulence 402 145 26
9. Penicillin-binding Protein 14 8 27
10. Flagellin 22 12 28
11. Colonization 23 14 29
12. Host-pathogen interaction 9 4 30
13. Toxin 542 110 31
  1. *Only those families/domains were included which are involved in host-pathogen interactions and/or pathogenesis.