Table 2 Key words used and selection of Pfam domains for protein vaccine candidate prediction
Sr. No. | Key word used for PFam domain search | No of domain hits | No of selected domains* | Reference |
|---|---|---|---|---|
1. | Adhesin | 166 | 96 | 19 |
2. | Choline binding protein | 29 | 12 | 20 |
3. | Bacterial extracellular solute-binding protein | 36 | 8 | 21 |
4. | Porin | 66 | 46 | 22 |
5. | Invasin | 30 | 25 | 23 |
6. | Fibronectin-binding protein | 50 | 25 | 24 |
7. | Transferrin-binding protein | 24 | 6 | 25 |
8. | Virulence | 402 | 145 | 26 |
9. | Penicillin-binding Protein | 14 | 8 | 27 |
10. | Flagellin | 22 | 12 | 28 |
11. | Colonization | 23 | 14 | 29 |
12. | Host-pathogen interaction | 9 | 4 | 30 |
13. | Toxin | 542 | 110 | 31 |