|
Methods
|
Rand index
|
|---|
|
300
|
450
|
1500
|
3000
|
5000
|
CATH
|
Density
|
Average
|
|---|
|
Hierarchy
|
0.883
|
0.942
|
0.896
|
0.920
|
0.981
|
0.964
|
0.928
|
0.931
|
|
Agnes
|
0.947
|
0.973
|
0.836
|
0.820
|
0.976
|
0.906
|
0.975
|
0.919
|
|
Clara
|
0.960
|
0.980
|
0.952
|
0.948
|
0.987
|
1.000
|
0.956
|
0.969
|
|
k-means
|
0.960
|
0.980
|
0.958
|
0.966
|
0.986
|
0.738
|
0.901
|
0.927
|
|
Mix Model
|
0.960
|
0.980
|
0.959
|
0.911
|
0.990
|
1.000
|
0.977
|
0.968
|
|
PFClust
|
0.960
|
1.000
|
0.958
|
0.949
|
0.986
|
0.996
|
0.976
|
0.975
|
|
DBSCAN
|
0.973
|
0.973
|
0.930
|
0.921
|
0.978
|
0.977
|
0.688
|
0.920
|
- The table summarizes the comparison between PFClust and the other six clustering algorithms based on the Rand Index between the clustering predicted by the method in question and the original gold standard clusters.
