| N
e
= 1,000; L= 5·106 | N
e
= 5,000; L= 106 |
---|
AF, F=100% | 20.2 secs | 128.9 secs |
AF, F=10% | 3.0 secs | 32.6 secs |
AF, F=1% | 2.0 secs | 26.6 secs |
AF, F=0% | 1.3 secs | 16.5 secs |
SFS_CODE
| 427.3 secs | 2910.4 secs |
- AnA-FiTS (AF) runtimes (in sec) for simulation of neutral sequences with a varying proportion F of mutations simulated forward in time (e.g., F:=10%⇒ 10% of mutations are simulated forward in time, 90% using the BEG algorithm); SFS_CODE runtime for comparison. Simulations for 10·N
e
generations, with per-base recombination and mutation frequency of 2.5·10−8.