BMC Bioinformatics

Table 2 Boolean-defined ID mapping strategies

From: A decision theory paradigm for evaluating identifier mapping and filtering methods using data integration

ID pair group	nPairs	Pr(+)	Pr(−)	Utrue	Lfalse	EU mean	EU total
N, E and D	853	0.434	0.566	0.867	0.566	0.301	257
N and E	1114	0.389	0.611	0.778	0.611	0.167	186
E and D	862	0.431	0.569	0.862	0.569	0.293	253
N and D	865	0.435	0.565	0.871	0.565	0.306	265
N or E	1434	0.330	0.670	0.660	0.670	−0.010	−14
E or D	1172	0.382	0.618	0.764	0.618	0.145	170
N or D	1423	0.335	0.665	0.671	0.665	0.006	9
N, E or D	1447	0.331	0.669	0.662	0.669	−0.007	−10

Columns: as in previous table. Rows: Boolean combinations of NetAffx-affirmed (N), EnVision-affirmed (E) and DAVID-affirmed (D) ID pairs.

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ISSN: 1471-2105

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