Table 2 The influence of sequence length l on (15, 4)
From: A fast weak motif-finding algorithm based on community detection in graphs
L | SPELLER | WEEDER(q) | MITRA | iTriplet | RecMotif | TFBSGroup(x)- | VINE |
|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Â | 1/5/10/b10/f | Â |
300 | 10.9m | 23.45s (20) | 1.46m | 1.18s | 0.08s | 4.8s(6)- | * |
| Â | Â | Â | Â | Â | Â | 100/100/100/0/0 | Â |
400 | 23.13m | 1.88m (19/f) | 2.38m | 1.02s | 0.19s | 8.1s(6)- | * |
| Â | Â | 3.55m (18) | Â | Â | Â | 100/100/100/0/0 | Â |
500 | 40.89m | 3.54m (19) | 3.33m | 4.88s | 0.36s | 11.3s(6)- | * |
| Â | Â | Â | Â | Â | Â | 98/100/100/0/0 | Â |
600 | 1.05h | 7.5m (19) | 4.3m | 4.11s | 0.74s | 16.1s(5)- | 11.7m |
| Â | Â | Â | Â | Â | Â | 95/98/99/0/1 | Â |
700 | 1.48h | 13.83m (19/f) | 5.21m | 9.77s | 1.16s | 21.8s(5)- | 19.6m |
| Â | Â | 34.17m (18) | Â | Â | Â | 98/100/100/0/0 | Â |
800 | 2.03h | 24.56m (19) | 6.25m | 16.53s | 2.03s | 28.5s(5)- | 27.0m |
| Â | Â | Â | Â | Â | Â | 99/100/100/0/0 | Â |
900 | 2.78h | 37.24m (19) | 7.48m | 43.92s | 3.17s | 36.5s(5)- | 25.3m |
| Â | Â | Â | Â | Â | Â | 98/99/100/0/0 | Â |
1000 | 3.62h | 51.47m (19/f) | 8.8m | 45.52s | 4.86s | 44.8s(5)- | 43.5m |
| Â | Â | 1.67h (18) | Â | Â | Â | 99/100/100/0/0 | Â |