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Table 2 Evaluation of disassembled relations in mouse datasets from the literature

From: Mining differential top-k co-expression patterns from time course comparative gene expression datasets

Methods

Comparison

TP

TN

FP

FN

New

Sensitivity

Specificity

Accuracy

Undifferentiation

Air

0(0)

0(0)

0(0)

0(0)

24(0)

0.00%

N/A

0.00%

Phosgene

0(0)

0(0)

0(0)

0(0)

30(0)

Constant degree

Air

1(0)

0(0)

0(0)

1(0)

63(0)

50.00%

N/A

50.00%

Phosgene

0(0)

0(0)

0(0)

0(0)

12(0)

Various degrees

Air

5(0)

0(0)

0(0)

0(0)

59(0)

71.43%

N/A

71.43%

Phosgene

5(0)

0(0)

0(0)

4(0)

39(0)

  1. Abbreviation: TP True positive, consistent with positive gene regulation in the literature, TN True negative, consistent with negative gene regulation in the literature, FP False positive, inconsistent with negative gene regulation in the literature, FN False negative, inconsistent with positive gene regulation in the literature; Sensitivity: # of TP / (# of TP + # of FN); Specificity: # of TN / (# of TN + # of FP); Accuracy: (# of TP + # of TN) / (# of TP + # of TN + # of FP + # of FN).