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Table 2 Significant KEGG pathways enriched in the combined dataset

From: PKIS: computational identification of protein kinases for experimentally discovered protein phosphorylation sites

Term

Count(2)

P-value

Benjamini P-value

Natural-killer-cell-mediated cytotoxicity

9 (2)

2.71E-08

1.27E-06

Fc-gamma-R-mediated phagocytosis

6 (1)

3.29E-05

7.72E-04

Fc epsilon RI signaling pathway

5 (1)

2.52E-04

2.95E-03

B cell receptor signaling pathway 1

5 (2)

2.16E-04

3.38E-03

Pathogenic Escherichia coli infection 1

4 (2)

1.54E-03

1.44E-02

ErbB signaling pathway

4 (0)

5.15E-03

3.97E-02

  1. 1 Term not found when only kinase-specific phosphorylated data was used in Phospho.ELM.
  2. 2 The number of Syk’s substrates predicted by PKIS at high specificity.