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Table 1 Comparison of ChIPmix, MultiChIPmixHMM and TileHMM after classification

From: MultiChIPmixHMM: an R package for ChIP-chip data analysis modeling spatial dependencies and multiple replicates

Scenario 1, classification with α = 0.01

 

false positive rate

true positive rate

ChIPmix Union

3.79e-04

0.32

ChIPmix Intersection

0

0.1

MultiChIPmixHMM

1.12e-04

0.42

TileHMM

0.13

0.83

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BMC Bioinformatics

ISSN: 1471-2105

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